If I were to install and run Debian Linux from an SD card or microSD card, would this be less reliable than running from a regular HDD (e.g. a 2.5" Western Digital Blue)? The system and home folders would all be placed on the SD card.
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It will only be limited by the quality of the SD card and slot. The SD card should at least have a much lower latency than your rotating hard drive.
This is an approved Debian installation method, as shown here:
https://wiki.debian.org/DebianEeePC/HowTo/InstallOnSDcardOrUsbStick
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